WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C01B7.4a.1 Sequence Name  C01B7.4a.1
Length (nt)  2782   Chromosome Location  V: 8792760-8801028
Chromosome . Primary Identifier  V Chromosome Location . Start  8792760
Chromosome Location . End  8801028 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C01B7.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006467 magu-2 C01B7.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C01B7.4a C01B7.4a 2493   V: 8793017-8793148

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C01B7.4a.1 8792760 8801028 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon190881   389   V: 8792760-8793148 Caenorhabditis elegans
Exon190883   162   V: 8793206-8793367 Caenorhabditis elegans
Exon190885   203   V: 8793411-8793613 Caenorhabditis elegans
Exon190887   290   V: 8793690-8793979 Caenorhabditis elegans
Exon190889   838   V: 8794067-8794904 Caenorhabditis elegans
Exon190891   159   V: 8795104-8795262 Caenorhabditis elegans
Exon190893   251   V: 8795317-8795567 Caenorhabditis elegans
Exon190897   88   V: 8800155-8800242 Caenorhabditis elegans
Exon190898   85   V: 8800303-8800387 Caenorhabditis elegans
Exon190899   110   V: 8800434-8800543 Caenorhabditis elegans
Exon190900   207   V: 8800822-8801028 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C01B7.4a.1 8792760 8801028 -1

1 Sequence

Length
2782

1 Sequence Ontology Term

Identifier Name Description
transcript