WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C01B7.6.1 Sequence Name  C01B7.6.1
Length (nt)  11574   Chromosome Location  V: 8805399-8819955
Chromosome . Primary Identifier  V Chromosome Location . Start  8805399
Chromosome Location . End  8819955 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C01B7.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004457 rpm-1 C01B7.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C01B7.6 C01B7.6 11301   V: 8805672-8805879

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C01B7.6.1 8805399 8819955 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon190903   481   V: 8805399-8805879 Caenorhabditis elegans
Exon190904   146   V: 8805957-8806102 Caenorhabditis elegans
Exon190905   738   V: 8806152-8806889 Caenorhabditis elegans
Exon190906   567   V: 8806933-8807499 Caenorhabditis elegans
Exon190907   687   V: 8807562-8808248 Caenorhabditis elegans
Exon190909   177   V: 8808299-8808475 Caenorhabditis elegans
Exon190910   960   V: 8808531-8809490 Caenorhabditis elegans
Exon190911   546   V: 8811192-8811737 Caenorhabditis elegans
Exon190912   2043   V: 8811790-8813832 Caenorhabditis elegans
Exon190913   3794   V: 8813883-8817676 Caenorhabditis elegans
Exon190914   145   V: 8817728-8817872 Caenorhabditis elegans
Exon190915   445   V: 8818019-8818463 Caenorhabditis elegans
Exon190916   434   V: 8818602-8819035 Caenorhabditis elegans
Exon190917   224   V: 8819477-8819700 Caenorhabditis elegans
Exon190918   187   V: 8819769-8819955 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C01B7.6.1 8805399 8819955 -1

1 Sequence

Length
11574

1 Sequence Ontology Term

Identifier Name Description
transcript