WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K06C4.6a.1 Sequence Name  K06C4.6a.1
Length (nt)  1727   Chromosome Location  V: 8909704-8914033
Chromosome . Primary Identifier  V Chromosome Location . Start  8909704
Chromosome Location . End  8914033 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K06C4.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003386 mod-1 K06C4.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K06C4.6a K06C4.6a 1470   V: 8909920-8909973

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K06C4.6a.1 8909704 8914033 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon191026   270   V: 8909704-8909973 Caenorhabditis elegans
Exon191028   111   V: 8910029-8910139 Caenorhabditis elegans
Exon191031   42   V: 8910731-8910772 Caenorhabditis elegans
Exon191032   88   V: 8910902-8910989 Caenorhabditis elegans
Exon191035   171   V: 8911110-8911280 Caenorhabditis elegans
Exon191038   103   V: 8911406-8911508 Caenorhabditis elegans
Exon191041   472   V: 8911568-8912039 Caenorhabditis elegans
Exon191045   124   V: 8912451-8912574 Caenorhabditis elegans
Exon191048   110   V: 8912628-8912737 Caenorhabditis elegans
Exon191051   138   V: 8913696-8913833 Caenorhabditis elegans
Exon191055   98   V: 8913936-8914033 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K06C4.6a.1 8909704 8914033 -1

1 Sequence

Length
1727

1 Sequence Ontology Term

Identifier Name Description
transcript