WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T19A5.2g.1 Sequence Name  T19A5.2g.1
Length (nt)  2969   Chromosome Location  V: 8949485-8956296
Chromosome . Primary Identifier  V Chromosome Location . Start  8949485
Chromosome Location . End  8956296 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T19A5.2g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001526 gck-1 T19A5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T19A5.2g T19A5.2g 1914   V: 8949658-8949690

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T19A5.2g.1 8949485 8956296 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon191176   206   V: 8949485-8949690 Caenorhabditis elegans
Exon191188   225   V: 8951858-8952082 Caenorhabditis elegans
Exon191196   166   V: 8952462-8952627 Caenorhabditis elegans
Exon191200   155   V: 8952725-8952879 Caenorhabditis elegans
Exon191212   189   V: 8953544-8953732 Caenorhabditis elegans
Exon191220   98   V: 8953787-8953884 Caenorhabditis elegans
Exon191228   205   V: 8953938-8954142 Caenorhabditis elegans
Exon191236   786   V: 8954524-8955309 Caenorhabditis elegans
Exon191245   939   V: 8955358-8956296 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T19A5.2g.1 8949485 8956296 1

1 Sequence

Length
2969

1 Sequence Ontology Term

Identifier Name Description
transcript