WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T19A5.4 Sequence Name  T19A5.4
Length (nt)  1287   Chromosome Location  V: 8961960-8962061
Chromosome . Primary Identifier  V Chromosome Location . Start  8961960
Chromosome Location . End  8962061
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T19A5.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE13732 NHR-44 50.5 428 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00053482
WBRNAi00064604
WBRNAi00018812
WBRNAi00035643
WBRNAi00115838
WBRNAi00106875

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T19A5.4 8961960 8962061 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003634 nhr-44 T19A5.4 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:T19A5.4 8961960 8962061 -1
CDS:T19A5.4 8962118 8962388 -1
CDS:T19A5.4 8962435 8962529 -1
CDS:T19A5.4 8962722 8962817 -1
CDS:T19A5.4 8962866 8963084 -1
CDS:T19A5.4 8963359 8963490 -1
CDS:T19A5.4 8963581 8963669 -1
CDS:T19A5.4 8963722 8963780 -1
CDS:T19A5.4 8963827 8963904 -1
CDS:T19A5.4 8963954 8964099 -1

1 Sequence

Length
1287

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T19A5.4.1 T19A5.4.1 1375   V: 8961878-8964105