WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T19A5.5.1 Sequence Name  T19A5.5.1
Length (nt)  1283   Chromosome Location  V: 8964662-8966186
Chromosome . Primary Identifier  V Chromosome Location . Start  8964662
Chromosome Location . End  8966186 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T19A5.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020555 nhr-219 T19A5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T19A5.5 T19A5.5 1227   V: 8964711-8964818

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T19A5.5.1 8964662 8966186 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon191306   157   V: 8964662-8964818 Caenorhabditis elegans
Exon191307   366   V: 8964866-8965231 Caenorhabditis elegans
Exon191308   96   V: 8965290-8965385 Caenorhabditis elegans
Exon191309   219   V: 8965437-8965655 Caenorhabditis elegans
Exon191310   155   V: 8965698-8965852 Caenorhabditis elegans
Exon191311   290   V: 8965897-8966186 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T19A5.5.1 8964662 8966186 -1

1 Sequence

Length
1283

1 Sequence Ontology Term

Identifier Name Description
transcript