WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R03H4.1.1 Sequence Name  R03H4.1.1
Length (nt)  2130   Chromosome Location  V: 9016779-9019359
Chromosome . Primary Identifier  V Chromosome Location . Start  9016779
Chromosome Location . End  9019359 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R03H4.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019849 oac-40 R03H4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R03H4.1 R03H4.1 1929   V: 9016930-9017033

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R03H4.1.1 9016779 9019359 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon191485   255   V: 9016779-9017033 Caenorhabditis elegans
Exon191486   93   V: 9017080-9017172 Caenorhabditis elegans
Exon191487   172   V: 9017215-9017386 Caenorhabditis elegans
Exon191488   129   V: 9017429-9017557 Caenorhabditis elegans
Exon191489   342   V: 9017605-9017946 Caenorhabditis elegans
Exon191490   121   V: 9017990-9018110 Caenorhabditis elegans
Exon191491   296   V: 9018158-9018453 Caenorhabditis elegans
Exon191492   121   V: 9018497-9018617 Caenorhabditis elegans
Exon191493   106   V: 9018664-9018769 Caenorhabditis elegans
Exon191494   274   V: 9018816-9019089 Caenorhabditis elegans
Exon191495   221   V: 9019139-9019359 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R03H4.1.1 9016779 9019359 1

1 Sequence

Length
2130

1 Sequence Ontology Term

Identifier Name Description
transcript