WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C25E10.3a.1 Sequence Name  C25E10.3a.1
Length (nt)  2469   Chromosome Location  V: 9035985-9038901
Chromosome . Primary Identifier  V Chromosome Location . Start  9035985
Chromosome Location . End  9038901 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25E10.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016093 srsx-34 C25E10.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25E10.3a C25E10.3a 1476   V: 9036493-9036544

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C25E10.3a.1 9035985 9038901 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon191485   560   V: 9035985-9036544 Caenorhabditis elegans
Exon191487   137   V: 9036594-9036730 Caenorhabditis elegans
Exon191489   116   V: 9036777-9036892 Caenorhabditis elegans
Exon191491   128   V: 9036938-9037065 Caenorhabditis elegans
Exon191493   114   V: 9037118-9037231 Caenorhabditis elegans
Exon191495   322   V: 9037277-9037598 Caenorhabditis elegans
Exon191497   141   V: 9037670-9037810 Caenorhabditis elegans
Exon191499   107   V: 9037858-9037964 Caenorhabditis elegans
Exon191501   241   V: 9038015-9038255 Caenorhabditis elegans
Exon191504   603   V: 9038299-9038901 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C25E10.3a.1 9035985 9038901 1

1 Sequence

Length
2469

1 Sequence Ontology Term

Identifier Name Description
transcript