WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T27E4.5.1 Sequence Name  T27E4.5.1
Length (nt)  835   Chromosome Location  V: 9068368-9069780
Chromosome . Primary Identifier  V Chromosome Location . Start  9068368
Chromosome Location . End  9069780 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T27E4.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020863 T27E4.5 T27E4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T27E4.5 T27E4.5 642   V: 9068475-9068500

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T27E4.5.1 9068368 9069780 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon191597   133   V: 9068368-9068500 Caenorhabditis elegans
Exon191598   51   V: 9068566-9068616 Caenorhabditis elegans
Exon191599   134   V: 9068665-9068798 Caenorhabditis elegans
Exon191600   113   V: 9068854-9068966 Caenorhabditis elegans
Exon191601   149   V: 9069184-9069332 Caenorhabditis elegans
Exon191602   255   V: 9069526-9069780 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T27E4.5.1 9068368 9069780 -1

1 Sequence

Length
835

1 Sequence Ontology Term

Identifier Name Description
transcript