WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0222.2.1 Sequence Name  B0222.2.1
Length (nt)  1485   Chromosome Location  V: 9135656-9137718
Chromosome . Primary Identifier  V Chromosome Location . Start  9135656
Chromosome Location . End  9137718 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0222.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015054 pitr-2 B0222.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0222.2 B0222.2 1485   V: 9135656-9135705

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0222.2.1 9135656 9137718 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon191730   50   V: 9135656-9135705 Caenorhabditis elegans
Exon191731   106   V: 9135752-9135857 Caenorhabditis elegans
Exon191732   201   V: 9135904-9136104 Caenorhabditis elegans
Exon191733   332   V: 9136157-9136488 Caenorhabditis elegans
Exon191734   120   V: 9136529-9136648 Caenorhabditis elegans
Exon191735   183   V: 9136699-9136881 Caenorhabditis elegans
Exon191736   141   V: 9136929-9137069 Caenorhabditis elegans
Exon191737   102   V: 9137132-9137233 Caenorhabditis elegans
Exon191738   75   V: 9137285-9137359 Caenorhabditis elegans
Exon191739   103   V: 9137410-9137512 Caenorhabditis elegans
Exon191740   72   V: 9137647-9137718 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0222.2.1 9135656 9137718 -1

1 Sequence

Length
1485

1 Sequence Ontology Term

Identifier Name Description
transcript