WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0222.3.1 Sequence Name  B0222.3.1
Length (nt)  1622   Chromosome Location  V: 9138946-9141397
Chromosome . Primary Identifier  V Chromosome Location . Start  9138946
Chromosome Location . End  9141397 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0222.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015055 pitr-3 B0222.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0222.3 B0222.3 1485   V: 9139081-9139130

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0222.3.1 9138946 9141397 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon191742   185   V: 9138946-9139130 Caenorhabditis elegans
Exon191743   106   V: 9139177-9139282 Caenorhabditis elegans
Exon191744   201   V: 9139331-9139531 Caenorhabditis elegans
Exon191745   332   V: 9139581-9139912 Caenorhabditis elegans
Exon191746   120   V: 9139962-9140081 Caenorhabditis elegans
Exon191747   183   V: 9140127-9140309 Caenorhabditis elegans
Exon191748   141   V: 9140356-9140496 Caenorhabditis elegans
Exon191749   102   V: 9140805-9140906 Caenorhabditis elegans
Exon191750   75   V: 9140956-9141030 Caenorhabditis elegans
Exon191751   103   V: 9141080-9141182 Caenorhabditis elegans
Exon191752   74   V: 9141324-9141397 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0222.3.1 9138946 9141397 -1

1 Sequence

Length
1622

1 Sequence Ontology Term

Identifier Name Description
transcript