WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C24B5.1.1 Sequence Name  C24B5.1.1
Length (nt)  1459   Chromosome Location  V: 9191610-9195886
Chromosome . Primary Identifier  V Chromosome Location . Start  9191610
Chromosome Location . End  9195886 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C24B5.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016044 sphr-1 C24B5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C24B5.1 C24B5.1 1284   V: 9191685-9191896

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C24B5.1.1 9191610 9195886 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon191849   287   V: 9191610-9191896 Caenorhabditis elegans
Exon191850   90   V: 9192944-9193033 Caenorhabditis elegans
Exon191851   127   V: 9193886-9194012 Caenorhabditis elegans
Exon191852   164   V: 9194645-9194808 Caenorhabditis elegans
Exon191853   228   V: 9194995-9195222 Caenorhabditis elegans
Exon191854   280   V: 9195277-9195556 Caenorhabditis elegans
Exon191855   283   V: 9195604-9195886 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C24B5.1.1 9191610 9195886 1

1 Sequence

Length
1459

1 Sequence Ontology Term

Identifier Name Description
transcript