WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C24B5.3.1 Sequence Name  C24B5.3.1
Length (nt)  3005   Chromosome Location  V: 9177949-9181719
Chromosome . Primary Identifier  V Chromosome Location . Start  9177949
Chromosome Location . End  9181719 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C24B5.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004216 ptr-1 C24B5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C24B5.3 C24B5.3 2871   V: 9178044-9178118

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C24B5.3.1 9177949 9181719 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon191893   170   V: 9177949-9178118 Caenorhabditis elegans
Exon191894   872   V: 9178164-9179035 Caenorhabditis elegans
Exon191895   238   V: 9179078-9179315 Caenorhabditis elegans
Exon191896   87   V: 9179361-9179447 Caenorhabditis elegans
Exon191897   270   V: 9179494-9179763 Caenorhabditis elegans
Exon191898   96   V: 9179823-9179918 Caenorhabditis elegans
Exon191899   807   V: 9179971-9180777 Caenorhabditis elegans
Exon191900   285   V: 9180849-9181133 Caenorhabditis elegans
Exon191901   78   V: 9181279-9181356 Caenorhabditis elegans
Exon191902   102   V: 9181618-9181719 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C24B5.3.1 9177949 9181719 -1

1 Sequence

Length
3005

1 Sequence Ontology Term

Identifier Name Description
transcript