WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T18H9.7.1 Sequence Name  T18H9.7.1
Length (nt)  2872   Chromosome Location  V: 9213754-9217258
Chromosome . Primary Identifier  V Chromosome Location . Start  9213754
Chromosome Location . End  9217258 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T18H9.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044077 pacs-1 T18H9.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T18H9.7 T18H9.7 2412   V: 9214134-9214252

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T18H9.7.1 9213754 9217258 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon191956   499   V: 9213754-9214252 Caenorhabditis elegans
Exon191957   732   V: 9214302-9215033 Caenorhabditis elegans
Exon191958   188   V: 9215082-9215269 Caenorhabditis elegans
Exon191959   311   V: 9215320-9215630 Caenorhabditis elegans
Exon191960   312   V: 9215675-9215986 Caenorhabditis elegans
Exon191961   278   V: 9216032-9216309 Caenorhabditis elegans
Exon191962   73   V: 9216363-9216435 Caenorhabditis elegans
Exon191963   225   V: 9216483-9216707 Caenorhabditis elegans
Exon191964   85   V: 9216756-9216840 Caenorhabditis elegans
Exon191965   169   V: 9217090-9217258 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T18H9.7.1 9213754 9217258 -1

1 Sequence

Length
2872

1 Sequence Ontology Term

Identifier Name Description
transcript