WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F44A2.5b.1 Sequence Name  F44A2.5b.1
Length (nt)  2016   Chromosome Location  V: 9297632-9302496
Chromosome . Primary Identifier  V Chromosome Location . Start  9297632
Chromosome Location . End  9302496 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F44A2.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018405 F44A2.5 F44A2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F44A2.5b F44A2.5b 1173   V: 9297873-9297887

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F44A2.5b.1 9297632 9302496 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon192098   256   V: 9297632-9297887 Caenorhabditis elegans
Exon192101   91   V: 9299565-9299655 Caenorhabditis elegans
Exon192103   135   V: 9299889-9300023 Caenorhabditis elegans
Exon192105   152   V: 9300186-9300337 Caenorhabditis elegans
Exon192106   108   V: 9300408-9300515 Caenorhabditis elegans
Exon192107   240   V: 9300564-9300803 Caenorhabditis elegans
Exon192108   302   V: 9300849-9301150 Caenorhabditis elegans
Exon192109   521   V: 9301677-9302197 Caenorhabditis elegans
Exon192110   48   V: 9302247-9302294 Caenorhabditis elegans
Exon192111   163   V: 9302334-9302496 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F44A2.5b.1 9297632 9302496 1

1 Sequence

Length
2016

1 Sequence Ontology Term

Identifier Name Description
transcript