WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F44A2.4.1 Sequence Name  F44A2.4.1
Length (nt)  1155   Chromosome Location  V: 9303326-9304622
Chromosome . Primary Identifier  V Chromosome Location . Start  9303326
Chromosome Location . End  9304622 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F44A2.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018404 nhr-39 F44A2.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F44A2.4 F44A2.4 1155   V: 9303326-9303406

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F44A2.4.1 9303326 9304622 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon192112   81   V: 9303326-9303406 Caenorhabditis elegans
Exon192113   345   V: 9303452-9303796 Caenorhabditis elegans
Exon192114   364   V: 9303846-9304209 Caenorhabditis elegans
Exon192115   365   V: 9304258-9304622 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F44A2.4.1 9303326 9304622 1

1 Sequence

Length
1155

1 Sequence Ontology Term

Identifier Name Description
transcript