WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F44A2.3.1 Sequence Name  F44A2.3.1
Length (nt)  2061   Chromosome Location  V: 9305416-9310926
Chromosome . Primary Identifier  V Chromosome Location . Start  9305416
Chromosome Location . End  9310926 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F44A2.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018403 F44A2.3 F44A2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F44A2.3 F44A2.3 1725   V: 9305545-9305607

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F44A2.3.1 9305416 9310926 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon192117   192   V: 9305416-9305607 Caenorhabditis elegans
Exon192118   79   V: 9306916-9306994 Caenorhabditis elegans
Exon192119   77   V: 9307091-9307167 Caenorhabditis elegans
Exon192120   104   V: 9307215-9307318 Caenorhabditis elegans
Exon192121   74   V: 9308109-9308182 Caenorhabditis elegans
Exon192122   305   V: 9308299-9308603 Caenorhabditis elegans
Exon192123   139   V: 9309161-9309299 Caenorhabditis elegans
Exon192124   56   V: 9309349-9309404 Caenorhabditis elegans
Exon192125   106   V: 9309454-9309559 Caenorhabditis elegans
Exon192126   121   V: 9309604-9309724 Caenorhabditis elegans
Exon192127   109   V: 9309770-9309878 Caenorhabditis elegans
Exon192128   79   V: 9309919-9309997 Caenorhabditis elegans
Exon192129   129   V: 9310041-9310169 Caenorhabditis elegans
Exon192130   163   V: 9310221-9310383 Caenorhabditis elegans
Exon192131   328   V: 9310599-9310926 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F44A2.3.1 9305416 9310926 1

1 Sequence

Length
2061

1 Sequence Ontology Term

Identifier Name Description
transcript