WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K07B1.7a.1 Sequence Name  K07B1.7a.1
Length (nt)  1646   Chromosome Location  V: 9345022-9346962
Chromosome . Primary Identifier  V Chromosome Location . Start  9345022
Chromosome Location . End  9346962 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K07B1.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019467 K07B1.7 K07B1.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K07B1.7a K07B1.7a 1512   V: 9345131-9345245

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K07B1.7a.1 9345022 9346962 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon192264   224   V: 9345022-9345245 Caenorhabditis elegans
Exon192269   180   V: 9345295-9345474 Caenorhabditis elegans
Exon192273   153   V: 9345529-9345681 Caenorhabditis elegans
Exon192277   127   V: 9345727-9345853 Caenorhabditis elegans
Exon192281   700   V: 9345898-9346597 Caenorhabditis elegans
Exon192285   137   V: 9346647-9346783 Caenorhabditis elegans
Exon192290   125   V: 9346838-9346962 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K07B1.7a.1 9345022 9346962 -1

1 Sequence

Length
1646

1 Sequence Ontology Term

Identifier Name Description
transcript