WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F36D4.3b.1 Sequence Name  F36D4.3b.1
Length (nt)  5844   Chromosome Location  V: 9386175-9400063
Chromosome . Primary Identifier  V Chromosome Location . Start  9386175
Chromosome Location . End  9400063 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36D4.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002036 hum-2 F36D4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36D4.3b F36D4.3b 5436   V: 9386230-9386286

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F36D4.3b.1 9386175 9400063 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon192396   112   V: 9386175-9386286 Caenorhabditis elegans
Exon192399   114   V: 9386384-9386497 Caenorhabditis elegans
Exon192401   518   V: 9386547-9387064 Caenorhabditis elegans
Exon192404   1927   V: 9387115-9389041 Caenorhabditis elegans
Exon192406   150   V: 9389091-9389240 Caenorhabditis elegans
Exon192409   90   V: 9389288-9389377 Caenorhabditis elegans
Exon192414   95   V: 9391871-9391965 Caenorhabditis elegans
Exon192421   142   V: 9392429-9392570 Caenorhabditis elegans
Exon192429   256   V: 9393172-9393427 Caenorhabditis elegans
Exon192442   601   V: 9393474-9394074 Caenorhabditis elegans
Exon192454   88   V: 9394123-9394210 Caenorhabditis elegans
Exon192468   78   V: 9396747-9396824 Caenorhabditis elegans
Exon192481   88   V: 9396868-9396955 Caenorhabditis elegans
Exon192496   117   V: 9398313-9398429 Caenorhabditis elegans
Exon192511   682   V: 9398499-9399180 Caenorhabditis elegans
Exon192526   301   V: 9399232-9399532 Caenorhabditis elegans
Exon192554   485   V: 9399579-9400063 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F36D4.3b.1 9386175 9400063 1

1 Sequence

Length
5844

1 Sequence Ontology Term

Identifier Name Description
transcript