WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F36D4.3a.1 Sequence Name  F36D4.3a.1
Length (nt)  5831   Chromosome Location  V: 9386181-9400062
Chromosome . Primary Identifier  V Chromosome Location . Start  9386181
Chromosome Location . End  9400062 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36D4.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002036 hum-2 F36D4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36D4.3a F36D4.3a 5430   V: 9386230-9386286

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F36D4.3a.1 9386181 9400062 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon192397   106   V: 9386181-9386286 Caenorhabditis elegans
Exon192398   114   V: 9386384-9386497 Caenorhabditis elegans
Exon192400   518   V: 9386547-9387064 Caenorhabditis elegans
Exon192403   1927   V: 9387115-9389041 Caenorhabditis elegans
Exon192405   150   V: 9389091-9389240 Caenorhabditis elegans
Exon192408   90   V: 9389288-9389377 Caenorhabditis elegans
Exon192413   95   V: 9391871-9391965 Caenorhabditis elegans
Exon192420   142   V: 9392429-9392570 Caenorhabditis elegans
Exon192435   250   V: 9393178-9393427 Caenorhabditis elegans
Exon192441   601   V: 9393474-9394074 Caenorhabditis elegans
Exon192453   88   V: 9394123-9394210 Caenorhabditis elegans
Exon192467   78   V: 9396747-9396824 Caenorhabditis elegans
Exon192480   88   V: 9396868-9396955 Caenorhabditis elegans
Exon192495   117   V: 9398313-9398429 Caenorhabditis elegans
Exon192510   682   V: 9398499-9399180 Caenorhabditis elegans
Exon192525   301   V: 9399232-9399532 Caenorhabditis elegans
Exon192553   484   V: 9399579-9400062 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F36D4.3a.1 9386181 9400062 1

1 Sequence

Length
5831

1 Sequence Ontology Term

Identifier Name Description
transcript