WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F36D4.3g.1 Sequence Name  F36D4.3g.1
Length (nt)  2502   Chromosome Location  V: 9391949-9399710
Chromosome . Primary Identifier  V Chromosome Location . Start  9391949
Chromosome Location . End  9399710 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36D4.3g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002036 hum-2 F36D4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36D4.3g F36D4.3g 2502   V: 9391949-9391965

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F36D4.3g.1 9391949 9399710 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon192416   17   V: 9391949-9391965 Caenorhabditis elegans
Exon192425   142   V: 9392429-9392570 Caenorhabditis elegans
Exon192433   256   V: 9393172-9393427 Caenorhabditis elegans
Exon192448   601   V: 9393474-9394074 Caenorhabditis elegans
Exon192460   88   V: 9394123-9394210 Caenorhabditis elegans
Exon192475   78   V: 9396747-9396824 Caenorhabditis elegans
Exon192489   88   V: 9396868-9396955 Caenorhabditis elegans
Exon192504   117   V: 9398313-9398429 Caenorhabditis elegans
Exon192520   682   V: 9398499-9399180 Caenorhabditis elegans
Exon192536   301   V: 9399232-9399532 Caenorhabditis elegans
Exon192542   132   V: 9399579-9399710 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F36D4.3g.1 9391949 9399710 1

1 Sequence

Length
2502

1 Sequence Ontology Term

Identifier Name Description
transcript