WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F36D4.3e.5 Sequence Name  F36D4.3e.5
Length (nt)  2834   Chromosome Location  V: 9392427-9400057
Chromosome . Primary Identifier  V Chromosome Location . Start  9392427
Chromosome Location . End  9400057 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36D4.3e.5

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002036 hum-2 F36D4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36D4.3e F36D4.3e 1323   V: 9396822-9396824

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F36D4.3e.5 9392427 9400057 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon192419   144   V: 9392427-9392570 Caenorhabditis elegans
Exon192432   256   V: 9393172-9393427 Caenorhabditis elegans
Exon192447   601   V: 9393474-9394074 Caenorhabditis elegans
Exon192459   88   V: 9394123-9394210 Caenorhabditis elegans
Exon192474   78   V: 9396747-9396824 Caenorhabditis elegans
Exon192487   88   V: 9396868-9396955 Caenorhabditis elegans
Exon192502   117   V: 9398313-9398429 Caenorhabditis elegans
Exon192517   682   V: 9398499-9399180 Caenorhabditis elegans
Exon192532   301   V: 9399232-9399532 Caenorhabditis elegans
Exon192551   479   V: 9399579-9400057 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F36D4.3e.5 9392427 9400057 1

1 Sequence

Length
2834

1 Sequence Ontology Term

Identifier Name Description
transcript