WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F36D4.3j.1 Sequence Name  F36D4.3j.1
Length (nt)  2379   Chromosome Location  V: 9392529-9399710
Chromosome . Primary Identifier  V Chromosome Location . Start  9392529
Chromosome Location . End  9399710 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36D4.3j.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002036 hum-2 F36D4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36D4.3j F36D4.3j 2379   V: 9392529-9392570

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F36D4.3j.1 9392529 9399710 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon192428   42   V: 9392529-9392570 Caenorhabditis elegans
Exon192439   250   V: 9393178-9393427 Caenorhabditis elegans
Exon192451   601   V: 9393474-9394074 Caenorhabditis elegans
Exon192463   88   V: 9394123-9394210 Caenorhabditis elegans
Exon192478   78   V: 9396747-9396824 Caenorhabditis elegans
Exon192492   88   V: 9396868-9396955 Caenorhabditis elegans
Exon192507   117   V: 9398313-9398429 Caenorhabditis elegans
Exon192523   682   V: 9398499-9399180 Caenorhabditis elegans
Exon192539   301   V: 9399232-9399532 Caenorhabditis elegans
Exon192545   132   V: 9399579-9399710 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F36D4.3j.1 9392529 9399710 1

1 Sequence

Length
2379

1 Sequence Ontology Term

Identifier Name Description
transcript