WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F36D4.4a.2 Sequence Name  F36D4.4a.2
Length (nt)  1644   Chromosome Location  V: 9401764-9405851
Chromosome . Primary Identifier  V Chromosome Location . Start  9401764
Chromosome Location . End  9405851 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36D4.4a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018089 F36D4.4 F36D4.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36D4.4a F36D4.4a 1359   V: 9402047-9402184

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F36D4.4a.2 9401764 9405851 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon192562   421   V: 9401764-9402184 Caenorhabditis elegans
Exon192568   78   V: 9402235-9402312 Caenorhabditis elegans
Exon192573   110   V: 9402988-9403097 Caenorhabditis elegans
Exon192578   323   V: 9403145-9403467 Caenorhabditis elegans
Exon192583   143   V: 9403560-9403702 Caenorhabditis elegans
Exon192588   157   V: 9403897-9404053 Caenorhabditis elegans
Exon192593   158   V: 9404104-9404261 Caenorhabditis elegans
Exon192598   78   V: 9404312-9404389 Caenorhabditis elegans
Exon192606   176   V: 9405676-9405851 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F36D4.4a.2 9401764 9405851 -1

1 Sequence

Length
1644

1 Sequence Ontology Term

Identifier Name Description
transcript