WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F36D4.4a.1 Sequence Name  F36D4.4a.1
Length (nt)  1911   Chromosome Location  V: 9401805-9414616
Chromosome . Primary Identifier  V Chromosome Location . Start  9401805
Chromosome Location . End  9414616 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36D4.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018089 F36D4.4 F36D4.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36D4.4a F36D4.4a 1359   V: 9402047-9402184

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F36D4.4a.1 9401805 9414616 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon192563   380   V: 9401805-9402184 Caenorhabditis elegans
Exon192567   78   V: 9402235-9402312 Caenorhabditis elegans
Exon192572   110   V: 9402988-9403097 Caenorhabditis elegans
Exon192577   323   V: 9403145-9403467 Caenorhabditis elegans
Exon192582   143   V: 9403560-9403702 Caenorhabditis elegans
Exon192587   157   V: 9403897-9404053 Caenorhabditis elegans
Exon192592   158   V: 9404104-9404261 Caenorhabditis elegans
Exon192597   78   V: 9404312-9404389 Caenorhabditis elegans
Exon192602   174   V: 9405676-9405849 Caenorhabditis elegans
Exon192614   72   V: 9412908-9412979 Caenorhabditis elegans
Exon192616   99   V: 9414129-9414227 Caenorhabditis elegans
Exon192619   139   V: 9414478-9414616 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F36D4.4a.1 9401805 9414616 -1

1 Sequence

Length
1911

1 Sequence Ontology Term

Identifier Name Description
transcript