WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F36D4.4b.1 Sequence Name  F36D4.4b.1
Length (nt)  1522   Chromosome Location  V: 9401890-9405849
Chromosome . Primary Identifier  V Chromosome Location . Start  9401890
Chromosome Location . End  9405849 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36D4.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018089 F36D4.4 F36D4.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36D4.4b F36D4.4b 1365   V: 9402047-9402184

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F36D4.4b.1 9401890 9405849 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon192564   295   V: 9401890-9402184 Caenorhabditis elegans
Exon192569   78   V: 9402235-9402312 Caenorhabditis elegans
Exon192574   110   V: 9402988-9403097 Caenorhabditis elegans
Exon192579   329   V: 9403145-9403473 Caenorhabditis elegans
Exon192584   143   V: 9403560-9403702 Caenorhabditis elegans
Exon192589   157   V: 9403897-9404053 Caenorhabditis elegans
Exon192594   158   V: 9404104-9404261 Caenorhabditis elegans
Exon192599   78   V: 9404312-9404389 Caenorhabditis elegans
Exon192603   174   V: 9405676-9405849 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F36D4.4b.1 9401890 9405849 -1

1 Sequence

Length
1522

1 Sequence Ontology Term

Identifier Name Description
transcript