WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F36D4.4d.1 Sequence Name  F36D4.4d.1
Length (nt)  1572   Chromosome Location  V: 9402047-9414513
Chromosome . Primary Identifier  V Chromosome Location . Start  9402047
Chromosome Location . End  9414513 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36D4.4d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018089 F36D4.4 F36D4.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36D4.4d F36D4.4d 1572   V: 9402047-9402184

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F36D4.4d.1 9402047 9414513 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon192566   138   V: 9402047-9402184 Caenorhabditis elegans
Exon192571   78   V: 9402235-9402312 Caenorhabditis elegans
Exon192576   110   V: 9402988-9403097 Caenorhabditis elegans
Exon192581   329   V: 9403145-9403473 Caenorhabditis elegans
Exon192586   143   V: 9403560-9403702 Caenorhabditis elegans
Exon192591   157   V: 9403897-9404053 Caenorhabditis elegans
Exon192596   158   V: 9404104-9404261 Caenorhabditis elegans
Exon192601   78   V: 9404312-9404389 Caenorhabditis elegans
Exon192605   174   V: 9405676-9405849 Caenorhabditis elegans
Exon192615   72   V: 9412908-9412979 Caenorhabditis elegans
Exon192617   99   V: 9414129-9414227 Caenorhabditis elegans
Exon192618   36   V: 9414478-9414513 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F36D4.4d.1 9402047 9414513 -1

1 Sequence

Length
1572

1 Sequence Ontology Term

Identifier Name Description
transcript