WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F36D4.5a.1 Sequence Name  F36D4.5a.1
Length (nt)  1696   Chromosome Location  V: 9419254-9425817
Chromosome . Primary Identifier  V Chromosome Location . Start  9419254
Chromosome Location . End  9425817 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36D4.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018090 F36D4.5 F36D4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36D4.5a F36D4.5a 1005   V: 9420391-9420770

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F36D4.5a.1 9419254 9425817 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon192624   586   V: 9419254-9419839 Caenorhabditis elegans
Exon192630   384   V: 9420387-9420770 Caenorhabditis elegans
Exon192635   435   V: 9420820-9421254 Caenorhabditis elegans
Exon192642   185   V: 9421318-9421502 Caenorhabditis elegans
Exon192654   106   V: 9425712-9425817 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F36D4.5a.1 9419254 9425817 -1

1 Sequence

Length
1696

1 Sequence Ontology Term

Identifier Name Description
transcript