WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K06A4.1.1 Sequence Name  K06A4.1.1
Length (nt)  1120   Chromosome Location  V: 9478163-9479601
Chromosome . Primary Identifier  V Chromosome Location . Start  9478163
Chromosome Location . End  9479601 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K06A4.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003522 nas-3 K06A4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K06A4.1 K06A4.1 879   V: 9478213-9478302

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K06A4.1.1 9478163 9479601 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon192760   140   V: 9478163-9478302 Caenorhabditis elegans
Exon192761   113   V: 9478358-9478470 Caenorhabditis elegans
Exon192762   601   V: 9478574-9479174 Caenorhabditis elegans
Exon192763   266   V: 9479336-9479601 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K06A4.1.1 9478163 9479601 1

1 Sequence

Length
1120

1 Sequence Ontology Term

Identifier Name Description
transcript