WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C50F4.14a.1 Sequence Name  C50F4.14a.1
Length (nt)  1258   Chromosome Location  V: 9547602-9549836
Chromosome . Primary Identifier  V Chromosome Location . Start  9547602
Chromosome Location . End  9549836 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C50F4.14a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008237 nstp-10 C50F4.14 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C50F4.14a C50F4.14a 1092   V: 9547768-9547933

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C50F4.14a.1 9547602 9549836 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon192905   332   V: 9547602-9547933 Caenorhabditis elegans
Exon192907   315   V: 9547990-9548304 Caenorhabditis elegans
Exon192909   443   V: 9548366-9548808 Caenorhabditis elegans
Exon192911   55   V: 9548854-9548908 Caenorhabditis elegans
Exon192913   86   V: 9548955-9549040 Caenorhabditis elegans
Exon192915   27   V: 9549810-9549836 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C50F4.14a.1 9547602 9549836 -1

1 Sequence

Length
1258

1 Sequence Ontology Term

Identifier Name Description
transcript