WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25B3.1.1 Sequence Name  F25B3.1.1
Length (nt)  2993   Chromosome Location  V: 9550644-9556032
Chromosome . Primary Identifier  V Chromosome Location . Start  9550644
Chromosome Location . End  9556032 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25B3.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009098 ehbp-1 F25B3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25B3.1 F25B3.1 2706   V: 9550644-9550718

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25B3.1.1 9550644 9556032 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon192918   75   V: 9550644-9550718 Caenorhabditis elegans
Exon192919   65   V: 9550761-9550825 Caenorhabditis elegans
Exon192920   455   V: 9550998-9551452 Caenorhabditis elegans
Exon192921   129   V: 9551504-9551632 Caenorhabditis elegans
Exon192922   220   V: 9551953-9552172 Caenorhabditis elegans
Exon192923   688   V: 9552222-9552909 Caenorhabditis elegans
Exon192924   166   V: 9553360-9553525 Caenorhabditis elegans
Exon192925   78   V: 9553626-9553703 Caenorhabditis elegans
Exon192926   60   V: 9553782-9553841 Caenorhabditis elegans
Exon192927   62   V: 9553935-9553996 Caenorhabditis elegans
Exon192928   120   V: 9554619-9554738 Caenorhabditis elegans
Exon192929   156   V: 9554853-9555008 Caenorhabditis elegans
Exon192930   314   V: 9555057-9555370 Caenorhabditis elegans
Exon192931   405   V: 9555628-9556032 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25B3.1.1 9550644 9556032 1

1 Sequence

Length
2993

1 Sequence Ontology Term

Identifier Name Description
transcript