WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K09G1.1b.2 Sequence Name  K09G1.1b.2
Length (nt)  1091   Chromosome Location  V: 9583545-9590520
Chromosome . Primary Identifier  V Chromosome Location . Start  9583545
Chromosome Location . End  9590520 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K09G1.1b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010727 K09G1.1 K09G1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K09G1.1b K09G1.1b 600   V: 9586240-9586302

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K09G1.1b.2 9583545 9590520 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon192979   149   V: 9583545-9583693 Caenorhabditis elegans
Exon192985   119   V: 9586184-9586302 Caenorhabditis elegans
Exon192995   123   V: 9589414-9589536 Caenorhabditis elegans
Exon193003   183   V: 9589704-9589886 Caenorhabditis elegans
Exon193011   114   V: 9589936-9590049 Caenorhabditis elegans
Exon193023   403   V: 9590118-9590520 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K09G1.1b.2 9583545 9590520 1

1 Sequence

Length
1091

1 Sequence Ontology Term

Identifier Name Description
transcript