WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K09G1.4c.1 Sequence Name  K09G1.4c.1
Length (nt)  2714   Chromosome Location  V: 9608556-9614937
Chromosome . Primary Identifier  V Chromosome Location . Start  9608556
Chromosome Location . End  9614937 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K09G1.4c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001053 dop-2 K09G1.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K09G1.4c K09G1.4c 2550   V: 9608580-9608750

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K09G1.4c.1 9608556 9614937 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon193029   195   V: 9608556-9608750 Caenorhabditis elegans
Exon193036   123   V: 9609230-9609352 Caenorhabditis elegans
Exon193043   113   V: 9610495-9610607 Caenorhabditis elegans
Exon193049   122   V: 9610821-9610942 Caenorhabditis elegans
Exon193055   108   V: 9610997-9611104 Caenorhabditis elegans
Exon193061   97   V: 9611155-9611251 Caenorhabditis elegans
Exon193067   68   V: 9611297-9611364 Caenorhabditis elegans
Exon193074   432   V: 9611966-9612397 Caenorhabditis elegans
Exon193077   115   V: 9612732-9612846 Caenorhabditis elegans
Exon193083   189   V: 9613293-9613481 Caenorhabditis elegans
Exon193092   269   V: 9613528-9613796 Caenorhabditis elegans
Exon193095   258   V: 9613842-9614099 Caenorhabditis elegans
Exon193101   170   V: 9614187-9614356 Caenorhabditis elegans
Exon193107   144   V: 9614433-9614576 Caenorhabditis elegans
Exon193116   311   V: 9614627-9614937 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K09G1.4c.1 9608556 9614937 1

1 Sequence

Length
2714

1 Sequence Ontology Term

Identifier Name Description
transcript