WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K09G1.4d.1 Sequence Name  K09G1.4d.1
Length (nt)  2367   Chromosome Location  V: 9608561-9614940
Chromosome . Primary Identifier  V Chromosome Location . Start  9608561
Chromosome Location . End  9614940 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K09G1.4d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001053 dop-2 K09G1.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K09G1.4d K09G1.4d 2205   V: 9608580-9608750

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K09G1.4d.1 9608561 9614940 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon193051   190   V: 9608561-9608750 Caenorhabditis elegans
Exon193058   123   V: 9609230-9609352 Caenorhabditis elegans
Exon193065   113   V: 9610495-9610607 Caenorhabditis elegans
Exon193071   122   V: 9610821-9610942 Caenorhabditis elegans
Exon193077   108   V: 9610997-9611104 Caenorhabditis elegans
Exon193083   97   V: 9611155-9611251 Caenorhabditis elegans
Exon193089   68   V: 9611297-9611364 Caenorhabditis elegans
Exon193093   87   V: 9611966-9612052 Caenorhabditis elegans
Exon193099   115   V: 9612732-9612846 Caenorhabditis elegans
Exon193105   189   V: 9613293-9613481 Caenorhabditis elegans
Exon193114   269   V: 9613528-9613796 Caenorhabditis elegans
Exon193117   258   V: 9613842-9614099 Caenorhabditis elegans
Exon193123   170   V: 9614187-9614356 Caenorhabditis elegans
Exon193129   144   V: 9614433-9614576 Caenorhabditis elegans
Exon193138   314   V: 9614627-9614940 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K09G1.4d.1 9608561 9614940 1

1 Sequence

Length
2367

1 Sequence Ontology Term

Identifier Name Description
transcript