WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K09G1.4a.1 Sequence Name  K09G1.4a.1
Length (nt)  2275   Chromosome Location  V: 9608562-9614936
Chromosome . Primary Identifier  V Chromosome Location . Start  9608562
Chromosome Location . End  9614936 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K09G1.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001053 dop-2 K09G1.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K09G1.4a K09G1.4a 2118   V: 9608580-9608750

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K09G1.4a.1 9608562 9614936 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon193052   189   V: 9608562-9608750 Caenorhabditis elegans
Exon193056   123   V: 9609230-9609352 Caenorhabditis elegans
Exon193063   113   V: 9610495-9610607 Caenorhabditis elegans
Exon193069   122   V: 9610821-9610942 Caenorhabditis elegans
Exon193075   108   V: 9610997-9611104 Caenorhabditis elegans
Exon193081   97   V: 9611155-9611251 Caenorhabditis elegans
Exon193087   68   V: 9611297-9611364 Caenorhabditis elegans
Exon193097   115   V: 9612732-9612846 Caenorhabditis elegans
Exon193103   189   V: 9613293-9613481 Caenorhabditis elegans
Exon193112   269   V: 9613528-9613796 Caenorhabditis elegans
Exon193115   258   V: 9613842-9614099 Caenorhabditis elegans
Exon193121   170   V: 9614187-9614356 Caenorhabditis elegans
Exon193127   144   V: 9614433-9614576 Caenorhabditis elegans
Exon193136   310   V: 9614627-9614936 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K09G1.4a.1 9608562 9614936 1

1 Sequence

Length
2275

1 Sequence Ontology Term

Identifier Name Description
transcript