WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K09G1.4f.1 Sequence Name  K09G1.4f.1
Length (nt)  2535   Chromosome Location  V: 9608580-9614797
Chromosome . Primary Identifier  V Chromosome Location . Start  9608580
Chromosome Location . End  9614797 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K09G1.4f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001053 dop-2 K09G1.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K09G1.4f K09G1.4f 2535   V: 9608580-9608750

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K09G1.4f.1 9608580 9614797 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon193033   171   V: 9608580-9608750 Caenorhabditis elegans
Exon193039   123   V: 9609230-9609352 Caenorhabditis elegans
Exon193046   113   V: 9610495-9610607 Caenorhabditis elegans
Exon193052   122   V: 9610821-9610942 Caenorhabditis elegans
Exon193058   108   V: 9610997-9611104 Caenorhabditis elegans
Exon193064   97   V: 9611155-9611251 Caenorhabditis elegans
Exon193070   68   V: 9611297-9611364 Caenorhabditis elegans
Exon193075   432   V: 9611966-9612397 Caenorhabditis elegans
Exon193080   115   V: 9612732-9612846 Caenorhabditis elegans
Exon193086   189   V: 9613293-9613481 Caenorhabditis elegans
Exon193089   254   V: 9613528-9613781 Caenorhabditis elegans
Exon193098   258   V: 9613842-9614099 Caenorhabditis elegans
Exon193104   170   V: 9614187-9614356 Caenorhabditis elegans
Exon193110   144   V: 9614433-9614576 Caenorhabditis elegans
Exon193112   171   V: 9614627-9614797 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K09G1.4f.1 9608580 9614797 1

1 Sequence

Length
2535

1 Sequence Ontology Term

Identifier Name Description
transcript