WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K09G1.4e.1 Sequence Name  K09G1.4e.1
Length (nt)  2307   Chromosome Location  V: 9608580-9614914
Chromosome . Primary Identifier  V Chromosome Location . Start  9608580
Chromosome Location . End  9614914 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K09G1.4e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001053 dop-2 K09G1.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K09G1.4e K09G1.4e 2190   V: 9608580-9608750

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K09G1.4e.1 9608580 9614914 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon193034   171   V: 9608580-9608750 Caenorhabditis elegans
Exon193038   123   V: 9609230-9609352 Caenorhabditis elegans
Exon193045   113   V: 9610495-9610607 Caenorhabditis elegans
Exon193051   122   V: 9610821-9610942 Caenorhabditis elegans
Exon193057   108   V: 9610997-9611104 Caenorhabditis elegans
Exon193063   97   V: 9611155-9611251 Caenorhabditis elegans
Exon193069   68   V: 9611297-9611364 Caenorhabditis elegans
Exon193073   87   V: 9611966-9612052 Caenorhabditis elegans
Exon193079   115   V: 9612732-9612846 Caenorhabditis elegans
Exon193085   189   V: 9613293-9613481 Caenorhabditis elegans
Exon193088   254   V: 9613528-9613781 Caenorhabditis elegans
Exon193097   258   V: 9613842-9614099 Caenorhabditis elegans
Exon193103   170   V: 9614187-9614356 Caenorhabditis elegans
Exon193109   144   V: 9614433-9614576 Caenorhabditis elegans
Exon193113   288   V: 9614627-9614914 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K09G1.4e.1 9608580 9614914 1

1 Sequence

Length
2307

1 Sequence Ontology Term

Identifier Name Description
transcript