WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T06E4.8.1 Sequence Name  T06E4.8.1
Length (nt)  719   Chromosome Location  V: 9622105-9622934
Chromosome . Primary Identifier  V Chromosome Location . Start  9622105
Chromosome Location . End  9622934 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T06E4.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011535 idpc-5 T06E4.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T06E4.8 T06E4.8 600   V: 9622224-9622230

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T06E4.8.1 9622105 9622934 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon193126   126   V: 9622105-9622230 Caenorhabditis elegans
Exon193127   531   V: 9622282-9622812 Caenorhabditis elegans
Exon193128   62   V: 9622873-9622934 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T06E4.8.1 9622105 9622934 -1

1 Sequence

Length
719

1 Sequence Ontology Term

Identifier Name Description
transcript