WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T06E4.3c Sequence Name  T06E4.3c
Length (nt)  3174   Chromosome Location  V: 9634980-9635177
Chromosome . Primary Identifier  V Chromosome Location . Start  9634980
Chromosome Location . End  9635177
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T06E4.3c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE45629 ATL-1, isoform c 122.0 1057 Caenorhabditis elegans
 

Other

12 RNAi

WormBase ID
WBRNAi00001871
WBRNAi00052654
WBRNAi00097003
WBRNAi00097012
WBRNAi00097011
WBRNAi00065645
WBRNAi00087556
WBRNAi00062958
WBRNAi00062960
WBRNAi00087557
WBRNAi00097005
WBRNAi00097013

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T06E4.3c 9634980 9635177 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000226 atl-1 T06E4.3 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:T06E4.3c 9634980 9635177 -1
CDS:T06E4.3c 9635226 9635906 -1
CDS:T06E4.3c 9635955 9636080 -1
CDS:T06E4.3c 9636339 9636992 -1
CDS:T06E4.3c 9637172 9638200 -1
CDS:T06E4.3c 9638249 9638380 -1
CDS:T06E4.3c 9638428 9638781 -1

1 Sequence

Length
3174

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T06E4.3c.1 T06E4.3c.1 3174   V: 9634980-9638781