WormMine: Gene WBGene00195322

• WormBase Gene ID: WBGene00195322
• Gene Name: T06E4.16
• Sequence Name: T06E4.16
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by cep-1 and ogt-1 based on RNA-seq studies.
• Biotype: SO:0001263
• Genetic Position: :±
• Length (nt): 134

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00195322

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:T06E4.16	T06E4.16	134	V: 9654285-9654418

Other

0 CDSs

0 RNAi Result

6 Allele

• gk963301
• gk964351
• gk962860
• gk963365
• gk963364
• WBVar01461264

1 Chromosome

• WormBase ID: V
• Organism: Caenorhabditis elegans
• Length (nt): 20924180

1 Chromosome Location

• Feature . Primary Identifier: WBGene00195322
• Start: 9654285
• End: 9654418
• Strand: 1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

1 Downstream Intergenic Region

• WormBase ID: intergenic_region_chrV_9654419..9654754
• Length (nt): 336
• Chromosome Location: V: 9654419-9654754
• Organism: Caenorhabditis elegans

2 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly decreased expression in ogt-1(ok1474) neuronal cells isolated by FACs comparing to in FACs isolated neuronal cells from wild type.	DESeq2, fold change > 2, FDR < 0.05.	WBPaper00066485:ogt-1(ok1474)_downregulated_neuron
	ncRNAs with significantly increased expression in cep-1(gk138) than in N2 under normal conditions, according to RNAseq.	ncRNAs with more than 2 fold difference in expression are considered differentially expressed	WBPaper00045380:cep-1(gk138)_upregulated_normal

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00195322
• Start: 9654285
• End: 9654418
• Strand: 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 134

1 Sequence Ontology Term