WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F40F9.6a Sequence Name  F40F9.6a
Length (nt)  2775   Chromosome Location  V: 9726305-9726430
Chromosome . Primary Identifier  V Chromosome Location . Start  9726305
Chromosome Location . End  9726430
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F40F9.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE05855 AAGR-3, isoform a 105.4 924 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00046888
WBRNAi00007994

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F40F9.6a 9726305 9726430 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009583 aagr-3 F40F9.6 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:F40F9.6a 9726305 9726430 -1
CDS:F40F9.6a 9726489 9726890 -1
CDS:F40F9.6a 9726955 9728159 -1
CDS:F40F9.6a 9728372 9728873 -1
CDS:F40F9.6a 9728921 9729172 -1
CDS:F40F9.6a 9729221 9729508 -1

1 Sequence

Length
2775

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F40F9.6a.1 F40F9.6a.1 3100   V: 9725984-9729512