WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58E6.10b.1 Sequence Name  F58E6.10b.1
Length (nt)  1038   Chromosome Location  V: 9764534-9769356
Chromosome . Primary Identifier  V Chromosome Location . Start  9764534
Chromosome Location . End  9769356 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58E6.10b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006778 unc-42 F58E6.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58E6.10b F58E6.10b 840   V: 9764645-9764816

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58E6.10b.1 9764534 9769356 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon193527   283   V: 9764534-9764816 Caenorhabditis elegans
Exon193534   176   V: 9764863-9765038 Caenorhabditis elegans
Exon193538   57   V: 9765089-9765145 Caenorhabditis elegans
Exon193543   181   V: 9766852-9767032 Caenorhabditis elegans
Exon193546   88   V: 9767443-9767530 Caenorhabditis elegans
Exon193552   115   V: 9768235-9768349 Caenorhabditis elegans
Exon193554   138   V: 9769219-9769356 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58E6.10b.1 9764534 9769356 -1

1 Sequence

Length
1038

1 Sequence Ontology Term

Identifier Name Description
transcript