WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00202439 Gene Name  F46B6.18
Sequence Name  ? F46B6.18 Organism  Caenorhabditis elegans
Automated Description  Enriched in AVK based on RNA-seq studies. Biotype  SO:0001263
Genetic Position  :± Length (nt)  ? 182
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00202439

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F46B6.18 F46B6.18 182   V: 9769363-9769544
 

Other

0 CDSs

0 RNAi Result

8 Allele

Public Name
gk963301
gk964351
gk962860
gk963365
gk963364
WBVar01863655
gk598
gk639951

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00202439 9769363 9769544 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrV_9769545..9772284   2740 V: 9769545-9772284 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts significantly enriched in AVK neurons comparing to all cell types at L1 larva stage. edgeR, FDR < 0.001, fold change > 2. WBPaper00055565:AVK_enriched

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00202439 9769363 9769544 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
182

1 Sequence Ontology Term