WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F46B6.6a.1 Sequence Name  F46B6.6a.1
Length (nt)  2327   Chromosome Location  V: 9783167-9786868
Chromosome . Primary Identifier  V Chromosome Location . Start  9783167
Chromosome Location . End  9786868 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46B6.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009771 F46B6.6 F46B6.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46B6.6a F46B6.6a 2109   V: 9783342-9783564

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F46B6.6a.1 9783167 9786868 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon193628   398   V: 9783167-9783564 Caenorhabditis elegans
Exon193630   407   V: 9783611-9784017 Caenorhabditis elegans
Exon193633   1134   V: 9784847-9785980 Caenorhabditis elegans
Exon193634   124   V: 9786059-9786182 Caenorhabditis elegans
Exon193636   151   V: 9786552-9786702 Caenorhabditis elegans
Exon193639   113   V: 9786756-9786868 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F46B6.6a.1 9783167 9786868 -1

1 Sequence

Length
2327

1 Sequence Ontology Term

Identifier Name Description
transcript