WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R07B5.5.1 Sequence Name  R07B5.5.1
Length (nt)  933   Chromosome Location  V: 9837979-9839508
Chromosome . Primary Identifier  V Chromosome Location . Start  9837979
Chromosome Location . End  9839508 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07B5.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011084 srsx-21 R07B5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R07B5.5 R07B5.5 933   V: 9837979-9838105

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R07B5.5.1 9837979 9839508 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon193735   127   V: 9837979-9838105 Caenorhabditis elegans
Exon193736   103   V: 9838181-9838283 Caenorhabditis elegans
Exon193737   184   V: 9838328-9838511 Caenorhabditis elegans
Exon193738   72   V: 9838562-9838633 Caenorhabditis elegans
Exon193739   91   V: 9838679-9838769 Caenorhabditis elegans
Exon193740   183   V: 9839084-9839266 Caenorhabditis elegans
Exon193741   173   V: 9839336-9839508 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R07B5.5.1 9837979 9839508 1

1 Sequence

Length
933

1 Sequence Ontology Term

Identifier Name Description
transcript