WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T11A5.3.1 Sequence Name  T11A5.3.1
Length (nt)  993   Chromosome Location  V: 9869887-9871439
Chromosome . Primary Identifier  V Chromosome Location . Start  9869887
Chromosome Location . End  9871439 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T11A5.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011702 srab-18 T11A5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T11A5.3 T11A5.3 993   V: 9869887-9869976

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T11A5.3.1 9869887 9871439 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon193964   90   V: 9869887-9869976 Caenorhabditis elegans
Exon193965   65   V: 9870020-9870084 Caenorhabditis elegans
Exon193966   131   V: 9870134-9870264 Caenorhabditis elegans
Exon193967   68   V: 9870305-9870372 Caenorhabditis elegans
Exon193968   108   V: 9870421-9870528 Caenorhabditis elegans
Exon193969   78   V: 9870574-9870651 Caenorhabditis elegans
Exon193970   154   V: 9870904-9871057 Caenorhabditis elegans
Exon193971   78   V: 9871100-9871177 Caenorhabditis elegans
Exon193972   221   V: 9871219-9871439 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T11A5.3.1 9869887 9871439 -1

1 Sequence

Length
993

1 Sequence Ontology Term

Identifier Name Description
transcript