WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T11A5.6c.1 Sequence Name  T11A5.6c.1
Length (nt)  2496   Chromosome Location  V: 9882034-9885968
Chromosome . Primary Identifier  V Chromosome Location . Start  9882034
Chromosome Location . End  9885968 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T11A5.6c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011705 clp-9 T11A5.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T11A5.6c T11A5.6c 1851   V: 9882276-9882413

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T11A5.6c.1 9882034 9885968 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon194003   380   V: 9882034-9882413 Caenorhabditis elegans
Exon194007   148   V: 9882469-9882616 Caenorhabditis elegans
Exon194010   398   V: 9882669-9883066 Caenorhabditis elegans
Exon194013   463   V: 9883186-9883648 Caenorhabditis elegans
Exon194016   291   V: 9883698-9883988 Caenorhabditis elegans
Exon194019   327   V: 9884030-9884356 Caenorhabditis elegans
Exon194022   192   V: 9885040-9885231 Caenorhabditis elegans
Exon194027   53   V: 9885567-9885619 Caenorhabditis elegans
Exon194030   88   V: 9885677-9885764 Caenorhabditis elegans
Exon194034   156   V: 9885813-9885968 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T11A5.6c.1 9882034 9885968 -1

1 Sequence

Length
2496

1 Sequence Ontology Term

Identifier Name Description
transcript