WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C50H2.3b.1 Sequence Name  C50H2.3b.1
Length (nt)  1857   Chromosome Location  V: 9907615-9910566
Chromosome . Primary Identifier  V Chromosome Location . Start  9907615
Chromosome Location . End  9910566 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C50H2.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003173 mec-9 C50H2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C50H2.3b C50H2.3b 1509   V: 9907906-9908144

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C50H2.3b.1 9907615 9910566 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon194084   530   V: 9907615-9908144 Caenorhabditis elegans
Exon194087   255   V: 9908192-9908446 Caenorhabditis elegans
Exon194089   114   V: 9908507-9908620 Caenorhabditis elegans
Exon194091   138   V: 9908663-9908800 Caenorhabditis elegans
Exon194093   138   V: 9908851-9908988 Caenorhabditis elegans
Exon194095   63   V: 9909178-9909240 Caenorhabditis elegans
Exon194097   106   V: 9909377-9909482 Caenorhabditis elegans
Exon194099   92   V: 9909560-9909651 Caenorhabditis elegans
Exon194101   150   V: 9909965-9910114 Caenorhabditis elegans
Exon194103   271   V: 9910296-9910566 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C50H2.3b.1 9907615 9910566 -1

1 Sequence

Length
1857

1 Sequence Ontology Term

Identifier Name Description
transcript