WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C50H2.3a Sequence Name  C50H2.3a
Length (nt)  2517   Chromosome Location  V: 9907906-9908144
Chromosome . Primary Identifier  V Chromosome Location . Start  9907906
Chromosome Location . End  9908144
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C50H2.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE05481 MEC-9, isoform a 96.4 838 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00067621
WBRNAi00042982
WBRNAi00012263
WBRNAi00112683
WBRNAi00089014

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C50H2.3a 9907906 9908144 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003173 mec-9 C50H2.3 Caenorhabditis elegans

19 Locations


Feature . Primary Identifier
Start End Strand
CDS:C50H2.3a 9907906 9908144 -1
CDS:C50H2.3a 9908192 9908446 -1
CDS:C50H2.3a 9908507 9908620 -1
CDS:C50H2.3a 9908663 9908800 -1
CDS:C50H2.3a 9908851 9908988 -1
CDS:C50H2.3a 9909178 9909240 -1
CDS:C50H2.3a 9909377 9909482 -1
CDS:C50H2.3a 9909560 9909651 -1
CDS:C50H2.3a 9909965 9910114 -1
CDS:C50H2.3a 9910296 9910346 -1
CDS:C50H2.3a 9912344 9912453 -1
CDS:C50H2.3a 9912888 9912981 -1
CDS:C50H2.3a 9913029 9913160 -1
CDS:C50H2.3a 9913219 9913323 -1
CDS:C50H2.3a 9913370 9913504 -1
CDS:C50H2.3a 9913548 9913658 -1
CDS:C50H2.3a 9913808 9913999 -1
CDS:C50H2.3a 9914733 9914933 -1
CDS:C50H2.3a 9914982 9915072 -1

1 Sequence

Length
2517

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C50H2.3a.1 C50H2.3a.1 2840   V: 9907632-9915121