WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00014833 Gene Name  T07C12.4
Sequence Name  ? T07C12.4 Organism  Caenorhabditis elegans
Automated Description  Is affected by clk-1 based on microarray studies. Biotype  SO:0000336
Genetic Position  Length (nt)  ? 3082
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00014833

Genomics

0 Transcripts

 

Other

0 CDSs

0 RNAi Result

38 Allele

Public Name
gk963301
WBVar02060567
gk964351
gk962860
gk964304
gk963572
gk964400
gk963573
tm10659
WBVar01864003
gk964497
tm11196
tm10618
gk244385
gk244386
gk244383
gk244384
gk244387
ttTi19205
gk761656
gk749116
gk774736
gk547683
gk597536
gk426563
WBVar01461340
gk851745
gk753259
gk613258
gk617939

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
WBGene00014833 9937804 9940885 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrV_9937536..9937803   268 V: 9937536-9937803 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Down-regulated genes (fold change > 1.5) in two CoQ-deficient clk-1 mutant strains (e2519, qm30) compared to wild types N2. Fold-changes of intensities were calculated from the arithmetic mean of gene expression values between experimental and corresponding control group. Fold change >= 1.5 was used as cut-off. WBPaper00045774:clk-1_downregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier
Start End Strand
WBGene00014833 9937804 9940885 -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
3082

1 Sequence Ontology Term